networkcommons.data.omics.panacea_tables

networkcommons.data.omics.panacea_tables(cell_line=None, drug=None, type='raw')

One table of countdata and one table of metadata from Panacea if raw data is selected. If diffexp or TF_scores is selected, the corresponding table is returned.

Parameters:

  • cell_line – Name of the cell line(s). For a complete list see panacea_experiments().

  • drug – Name of the drug(s). For a complete list see panacea_experiments().

  • type – Type of data. For a complete list see panacea_datatypes().

Returns:

Two data frames: counts and meta data.

Return type:

tuple[pd.DataFrame]